Gene

bcam

ID

ZDB-GENE-060929-620

Name

basal cell adhesion molecule (Lutheran blood group)

Symbol

bcam Nomenclature History

Previous Names

LU
zgc:154034

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Is expressed in several structures, including cardiovascular system; mesoderm; nervous system; pronephros; and tail bud. Orthologous to human BCAM (basal cell adhesion molecule (Lutheran blood group)).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2008

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cssl:d228 (23 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bcam Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		[Blood group, Auberger system]	111200
		[Blood group, Lutheran null]	247420
		[Blood group, Lutheran system]	111200

Associated With bcam Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003598	Immunoglobulin subtype 2
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013106	Immunoglobulin V-set domain
Domain	IPR013162	CD80-like, immunoglobulin C2-set
Family	IPR051275	Cellular adhesion and signaling domain-containing protein
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	CD80-like, immunoglobulin C2-set	Cellular adhesion and signaling domain-containing protein	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype 2	Immunoglobulin V-set domain
UniProtKB:A0A8M2B4H6 InterPro	611
UniProtKB:A0A8M9NZD6 InterPro	604
UniProtKB:Q08BX5 InterPro	547
UniProtKB:A0A8M6Z4U4 InterPro	375
UniProtKB:F1QN52 InterPro	320

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	bcam-201 (1) Ensembl	Ensembl	1,963 nt	Select Tool
mRNA	bcam-202 (1) Ensembl	Ensembl	729 nt	Select Tool
mRNA	bcam-203 (1) Ensembl	Ensembl	553 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations